What is the Purpose of Running a Gel After Electrophoresis?

Electrophoresis is a laboratory technique used to separate molecules based on their size and electrical properties. After electrophoresis, a gel is run to visualize and analyze the separated molecules. The purpose of running a gel is to:

  1. Confirm Electrophoresis Results: The gel provides a physical representation of the separation, allowing researchers to verify the electrophoresis process and ensure that the molecules were separated as expected.
  2. Measure Molecular Size: By comparing the distance that the molecules traveled in the gel to a known molecular ladder, researchers can determine the size of the unknown molecules.
  3. Identify Specific Molecules: Some gels contain fluorescent or radioactive dyes that bind to specific molecules. This allows researchers to identify and quantify the presence of specific molecules in the sample.
  4. Isolate DNA or RNA Fragments: Gels can be used to isolate DNA or RNA fragments of specific sizes. This is useful for further analysis, such as sequencing or cloning.
  5. Determine Molecular Interactions: Gels can also be used to study molecular interactions, such as protein-protein or protein-DNA binding. By analyzing the interactions between molecules on the gel, researchers can gain insights into their functions and relationships.
  • What is the difference between agarose and polyacrylamide gels?
  • How can I load samples onto a gel?
  • What are the different types of dyes used in gel electrophoresis?
  • How can I calculate the size of DNA fragments using a gel?
  • What are the limitations of gel electrophoresis?
  • Bio-Rad Gel Doc™ EZ Imager
  • Invitrogen™ E-Gel® Power Snap Electrophoresis System
  • Thermo Fisher Scientific™ Mini Gel Tank
  • Biometra™ XCell™ SureLock™ Mini-Cell Electrophoresis System
  • Agilent Technologies 2100 Bioanalyzer

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